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Protein Overview: gi|15239941, gi|...

General Information:
Name(s) found: gi|7630048 [NCBI NR]
gi|15239941 [NCBI NR]
gi|11288889 [NCBI NR]
Description(s) found:
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  • gi|7630048|emb|CAB88256.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15239941|ref|NP_196796.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T49906 hypothetical protein T24H18.100 - Arabidopsis thaliana [NCBI NR]
  • (Q9LXU7) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11288889|pir||T49906 hypothetical protein T24H18.100 - Arabidopsis thalianagi|15239941|ref|NP_196796.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRRGVAGL DFDNRVRSLI NTFGLVSVHV QCYFIISDLC LRDSSHQGIF LVSVTRSGCL  60
   61 MVHDFESLYC QSKLGPGSAE DESKHVVHFS YPPGREFDVA RWNPSNQNEV ACTSRKHDQV 120
  121 LIFDISYMSP KPTEVLQTRQ KLSIIGRKIS RGLSDVAITS DEDSRIFSPD TLGMVHVWDR 180
  181 RAGVSPCIEL STDRYDSIKS IQIYVDNQTI FGAGKEGIIH IWDLRGGRNS SAFQSRKDVS 240
  241 LTRGELELAM AMSQLPLASL HLAPKLQKIA SLKAQSEIVP KEIHSIDVNP SSPHQLAFHL 300
  301 DDGWSGVLDI YKSEVTHVHC PPPAWLDGSN SSADLILRKP SWLPTSSIYV VGSMSEKGIH 360
  361 VLDFHPSSRS PCHVDYDEDT QRNEKRDKCN HRNKFVSLSE TVTGCAAHPL NGMIVAGTQN 420
  421 SSLLLIAQMH CSSSSETAEG EL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..442] PSI-BLAST 53.69897 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle