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View Structure Prediction Details

Protein: gi|15239941, gi|...
Organism: Arabidopsis thaliana
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15239941, gi|....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
430.0 [0..3] [441..1171]

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Predicted Domain #1
Region A:
Residues: [1-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRRGVAGL DFDNRVRSLI NTFGLVSVHV QCYFIISDLC LRDSSHQGIF LVSVTRSGCL  60
   61 MVHDFESLYC QSKLGPGSAE DESKHVVHFS YPPGREFDVA RWNPSNQNEV ACTSRKHDQV 120
  121 LIFDISYMSP KPTEVLQTRQ KLSIIGRKIS RGLSDVAITS DEDSRIFSPD TLGMVHVWDR 180
  181 RAGVSPCIEL STDRYDSIKS IQIYVDNQTI FGAGKEGIIH IWDLRGGRNS SAFQSRKDVS 240
  241 LTRGELELAM AMSQLPLASL HLAPKLQKIA SLKAQSEIVP KEIHSIDVNP SSPHQLAFHL 300
  301 DDGWSGVLDI YKSEVTHVHC PPPAWLDGSN SSADLILRKP SWLPTSSIYV VGSMSEKGIH 360
  361 VLDFHPSSRS PCHVDYDEDT QRNEKRDKCN HRNKFVSLSE TVTGCAAHPL NGMIVAGTQN 420
  421 SSLLLIAQMH CSSSSETAEG EL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle