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Protein Overview: DTX19_ARATH

General Information:
Name(s) found: DTX19_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294512|dbj|BAB02774.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|18403810|ref|NP_566730.1| ALF5 (ABERRANT LATERAL ROOT FORMATION 5); antiporter/ drug transporter/ transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|17064870|gb|AAL32589.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13384114|gb|AAK21273.1|AF337954_1 aberrant lateral root formation 5 [Arabidopsis thaliana] [NCBI NR]
  • Protein DETOXIFICATION 19 OS=Arabidopsis thaliana GN=DTX19 PE=2 SV=1 [Swiss-Prot]
  • MATE efflux family protein ALF5 OS=Arabidopsis thaliana GN=ALF5 PE=2 SV=1 [Swiss-Prot]
  • (Q9LUH2) Aberrant lateral root formation 5 (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|17064870|gb|AAL32589.1| Unknown protein [Arabidopsis thaliana]gi|13384114|gb|AAK21273.1| aberrant lateral root formation 5 [Arabidopsis thaliana]gi|18403810|ref|NP_566730.1| MATE efflux family protein [A [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MATE efflux family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ALF5 | ALF5 (ABERRANT LATERAL ROOT FORMATION 5); antiporter/ transporter | chr3:8454368-8456595 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ALF5 (ABERRANT LATERAL ROOT FORMATION 5); antiporter/ drug transporter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • aberrant lateral root formation 5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ALF5 | MATE efflux family protein | chr3:8454361-8456588 REVERSE LENGTH=477 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 477 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: response to toxin [ISS]
    Molecular Function: antiporter activity [IEA][ISS]
    drug transmembrane transporter activity [IEA]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI  60
   61 PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS LETLCGQGFG AKRYRMLGVH 120
  121 LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL 180
  181 RFCQTQSIIA PLVIFSFVPL VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV 240
  241 MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS 300
  301 LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV 360
  361 LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG VLSGVARGCG WQRLVTVINL 420
  421 ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] Pfam 33.508638 No description for PF01554.9 was found. No confident structure predictions are available.
    2 View Details [258..477] Pfam 27.443697 No description for PF01554.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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