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View Structure Prediction Details

Protein: DTX19_ARATH
Organism: Arabidopsis thaliana
Length: 477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX19_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
313.0 [0..30] [476..636]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI  60
   61 PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS LETLCGQGFG AKRYRMLGVH 120
  121 LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL 180
  181 RFCQTQSIIA PLVIFSFVPL VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV 240
  241 MCSEKFKETW TGFSLES

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 33.508638
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [258-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FRYIVINLTL SLPSAAMVCL EYWAFEILVF LAGVMPNPEI NTSLVAICVN TEAISYMLTY  60
   61 GLSAAASTRV SNELGAGNVK GAKKATSVSV KLSLVLALGV VIVLLVGHDG WVGLFSDSYV 120
  121 IKEEFASLRF FLAASITLDS IQGVLSGVAR GCGWQRLVTV INLATFYLIG MPIAAFCGFK 180
  181 LKFYAKGLWI GLICGIFCQS SSLLLMTIFR KWTKLNVATV 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.443697
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle