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Protein Overview: gi|7486657, gi|3...

General Information:
Name(s) found: gi|7486657 [NCBI NR]
gi|7270505 [NCBI NR]
gi|3367572 [NCBI NR]
gi|15237034 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T04659 hypothetical protein F8D20.50 - Arabidopsis thaliana [NCBI NR]
  • gi|7270505|emb|CAB80270.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|3367572|emb|CAA20024.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237034|ref|NP_195279.1| transcription regulator/ zinc ion binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 527 amino acids

    Gene Ontology:
    Cellular Component: transcription factor complex [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    transcription initiation [IEA]
    regulation of transcription [IEA]
    Molecular Function: zinc ion binding [IEA]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCKRCNGSN FERDEDTGNS YCGGCGTLRE YDNYEAQLGG IRGPQGTYIR VGTIGRGSVL  60
   61 DYKDKKIYEA NNLIEETTER LNLGNKTEVI KSMISKLTDG EFGQGEWFPI LIGACCYAVV 120
  121 REEGKGVLSM EEVAYEVGCD LHQLGPMIKR VVDHLDLELR EFDLVGLFTK TVTNSPRLTD 180
  181 VDRDKKEKII KQGTFLMNCA LKWFLSTGRR PMPLVVAVLA FVVQVNGVKV KIDDLAKDAS 240
  241 VSLTTCKTRY KELSEKLVKV AEEVGLPWAK DVTVKNVLKH SGTLFALMEA KSMKKRKQGT 300
  301 GKELVRTDGF CVEDLVMDCL SKESMYCYDD DARQDTMSRY FDVEGERQLS LCNYDDNISE 360
  361 NQLSTKYNEF EDRVCGGTLA KRSQGSSQSM WQRRSVFGMV STENWWKGKS ELSKRLLLKD 420
  421 LLEKDVGLEA LPPSYIKGCV AVERRREKIK AAKLRINAIQ HPSDNVSEGA LSLELEHSKK 480
  481 KRKKGSEIDW EDLVIQTLVL HNVNEEEIEK GHYKTLLDLH VFNSGEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] PSI-BLAST 59.522879 Transcription factor IIB (TFIIB), core domain
    2 View Details [329..527] MSA 2.052927 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle