| Protein: | gi|7486657, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 527 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7486657, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
445.0 | [0..2] | [522..4] |
|
Region A: Residues: [1-328] |
1 11 21 31 41 51
| | | | | |
1 MRCKRCNGSN FERDEDTGNS YCGGCGTLRE YDNYEAQLGG IRGPQGTYIR VGTIGRGSVL 60
61 DYKDKKIYEA NNLIEETTER LNLGNKTEVI KSMISKLTDG EFGQGEWFPI LIGACCYAVV 120
121 REEGKGVLSM EEVAYEVGCD LHQLGPMIKR VVDHLDLELR EFDLVGLFTK TVTNSPRLTD 180
181 VDRDKKEKII KQGTFLMNCA LKWFLSTGRR PMPLVVAVLA FVVQVNGVKV KIDDLAKDAS 240
241 VSLTTCKTRY KELSEKLVKV AEEVGLPWAK DVTVKNVLKH SGTLFALMEA KSMKKRKQGT 300
301 GKELVRTDGF CVEDLVMDCL SKESMYCY
|
| Detection Method: |  |
| Confidence: | 59.522879 |
| Match: | 1c9bA |
| Description: | Transcription factor IIB (TFIIB), core domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [329-527] |
1 11 21 31 41 51
| | | | | |
1 DDDARQDTMS RYFDVEGERQ LSLCNYDDNI SENQLSTKYN EFEDRVCGGT LAKRSQGSSQ 60
61 SMWQRRSVFG MVSTENWWKG KSELSKRLLL KDLLEKDVGL EALPPSYIKG CVAVERRREK 120
121 IKAAKLRINA IQHPSDNVSE GALSLELEHS KKKRKKGSEI DWEDLVIQTL VLHNVNEEEI 180
181 EKGHYKTLLD LHVFNSGEV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
