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Protein Overview: LCV2_ARATH

General Information:
Name(s) found: LCV2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|51971717|dbj|BAD44523.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|51971581|dbj|BAD44455.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|194579027|gb|ACF75547.1| At1g43130 [Arabidopsis thaliana] [NCBI NR]
  • gi|18400825|ref|NP_564483.1| LCV2 (LIKE COV 2) [Arabidopsis thaliana] [NCBI NR]
  • gi|12321538|gb|AAG50825.1|AC026757_6 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Protein LIKE COV 2 OS=Arabidopsis thaliana GN=LCV2 PE=2 SV=1 [Swiss-Prot]
  • (Q9C8C1) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|51971581|dbj|BAD44455.1| unknown protein [Arabidopsis thaliana]gi|12321538|gb|AAG50825.1| unknown protein [Arabidopsis thaliana]gi|18400825|ref|NP_564483.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: LCV2 | LCV2 (LIKE COV 2) | chr1:16231101-16233598 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • LCV2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: LCV2 | like COV 2 | chr1:16228661-16231158 REVERSE LENGTH=261 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g43130 OS=Arabidopsis thaliana GN=F2H10.2 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 261 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: stem vascular tissue pattern formation [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGKEATTS SLSQGLTPHQ DPDDAPKSPP NSPNSSTRKA CYGVLQSWVS KKFMTGFVVL  60
   61 FPVAVTFLIT WWFIQFVDGF FSPIYENLGV DIFGLGFITS VLFTFFVGIF ASSWLGSTVF 120
  121 WLGEQFIRRM PFVKHIYSAS KQISTAISPD QNTTAFKEVA IIRHPRIGEY AFGFITSSVT 180
  181 LQTDHGEEEL CSVYVPTNHL YIGDVFLVSS EEIIRPNLSI REGIEIIVSV GMTMPQVISH 240
  241 VDRTTNRTPH QHSLRVPLNR L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] MSA 1.100986 View MSA. No confident structure predictions are available.
    2 View Details [94..261] Pfam 82.769551 No description for PF04367.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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