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Protein Overview: gi|12322896, gi|...

General Information:
Name(s) found: gi|41619234 [NCBI NR]
gi|28827618 [NCBI NR]
gi|28393104 [NCBI NR]
gi|15229748 [NCBI NR]
gi|12322896 [NCBI NR]
gi|12003234 [NCBI NR]
Description(s) found:
Found 17 descriptions.
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  • gi|41619234|gb|AAS10055.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|28827618|gb|AAO50653.1| putative Myb DNA-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28393104|gb|AAO41985.1| putative Myb DNA-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15229748|ref|NP_187751.1| MYB65 (MYB DOMAIN PROTEIN 65); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|12322896|gb|AAG51434.1|AC008153_7 putative transcription factor; 45591-47464 [Arabidopsis thaliana] [NCBI NR]
  • gi|12003234|gb|AAG43496.1|AF048840_1 MYB65 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 553 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: pollen sperm cell differentiation [IGI]
    gibberellic acid mediated signaling pathway [TAS]
    response to salicylic acid stimulus [IEP]
    regulation of transcription [TAS]
    response to ethylene stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK  60
   61 HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS QEEEQLIVEM HAKMGNKWAQ 120
  121 MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR 180
  181 HQDFLQLGNS KDNVLFDDLN FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS 240
  241 PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM 300
  301 MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY 360
  361 IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL LMSSPQKSFS STTCTTNVTQ 420
  421 NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR 480
  481 VDITRPDVLL ASSWLDQGCY GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG 540
  541 SYGWTNMPPV WSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 59.30103 c-Myb, DNA-binding domain
    2 View Details [150..345] deduced N/A No confident structure predictions are available.
    3 View Details [346..553] MSA 4.171976 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle