| Protein: | gi|12322896, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 553 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12322896, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
285.0 | [0..2] | [516..34] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK 60
61 HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS QEEEQLIVEM HAKMGNKWAQ 120
121 MAEHLPGRTD NEIKNYWNTR IKRRQRAGL
|
| Detection Method: |  |
| Confidence: | 59.30103 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [150-345] |
1 11 21 31 41 51
| | | | | |
1 PLYPPEIYVD DLHWSEEYTK SNIIRVDRRR RHQDFLQLGN SKDNVLFDDL NFAASLLPAA 60
61 SDLSDLVACN MLGTGASSSR YESYMPPILP SPKQIWESGS RFPMCSSNIK HEFQSPEHFQ 120
121 NTAVQKNPRS CSISPCDVDH HPYENQHSSH MMMVPDSHTV TYGMHPTSKP LFGAVKLELP 180
181 SFQYSETSAF DQWKTT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [346-553] |
1 11 21 31 41 51
| | | | | |
1 PSPPHSDLLD SVDAYIQSPP PSQVEESDCF SSCDTGLLDM LLHEAKIKTS AKHSLLMSSP 60
61 QKSFSSTTCT TNVTQNVPRG SENLIKSGEY EDSQKYLGRS EITSPSQLSA GGFSSAFAGN 120
121 VVKTEELDQV WEPKRVDITR PDVLLASSWL DQGCYGIVSD TSSMSDALAL LGGDDIGNSY 180
181 VTVGSSSGQA PRGVGSYGWT NMPPVWSL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
