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Protein Overview: ABA2_ARATH

General Information:
Name(s) found: ABA2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75308867|sp|Q9C826.1|ABA2_ARATH RecName: Full=Xanthoxin dehydrogenase; AltName: Full=Xanthoxin oxidase; AltName: Full=Short-chain alcohol dehydrogenase ABA2; AltName: Full=Protein GLUCOSE INSENSITIVE 1; AltName: Full=Protein IMPAIRED SUCROSE INDUCTION [NCBI NR]
  • gi|28059614|gb|AAO30075.1| short chain alcohol dehydrogenase, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||F96563 hypothetical protein F19K6.3 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22651517|gb|AAL99238.1| short-chain dehydrogenase/reductase [Arabidopsis thaliana] [NCBI NR]
  • gi|22651515|gb|AAL99237.1| short-chain dehydrogenase/reductase [Arabidopsis thaliana] [NCBI NR]
  • gi|20466274|gb|AAM20454.1| short chain alcohol dehydrogenase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15218213|ref|NP_175644.1| ABA2 (ABA DEFICIENT 2); alcohol dehydrogenase/ oxidoreductase/ xanthoxin dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • gi|12323116|gb|AAG51536.1|AC037424_1 short chain alcohol dehydrogenase, putative; 41546-43076 [Arabidopsis thaliana] [NCBI NR]
  • Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1 [Swiss-Prot]
  • (Q9C826) Short chain alcohol dehydrogenase, putative (Short-chain dehydrogenase/reductase) [athaliana3702.FASTAC.txt]
  • short-chain dehydrogenase/reductase [Arabidopsis thaliana]gi|22651515|gb|AAL99237.1| short-chain dehydrogenase/reductase [Arabidopsis thaliana]gi|20466274|gb|AAM20454.1| short chain alcohol dehydrogenase, putative [Arabidopsis thaliana]gi|28059614|gb|A [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Short-chain dehydrogenase/reductase (SDR) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ABA2 | ABA2 (ABA DEFICIENT 2); oxidoreductase | chr1:19493666-19495196 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • short chain alcohol dehydrogenase, putative; 41546-43076 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • short chain alcohol dehydrogenase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • short-chain dehydrogenase/reductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ABA2 (ABA DEFICIENT 2); oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:19489997-19491527 REVERSE LENGTH=285 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 285 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Biological Process: response to heat [IMP]
    sugar mediated signaling pathway [TAS]
    abscisic acid biosynthetic process [IMP]
    regulation of abscisic acid biosynthetic process [IMP]
    proline biosynthetic process [IMP]
    response to water deprivation [IMP]
    Molecular Function: oxidoreductase activity [ISS]
    alcohol dehydrogenase (NAD) activity [IDA]
    xanthoxin dehydrogenase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNTESSSY SSLPSQRLLG KVALITGGAT GIGESIVRLF HKHGAKVCIV DLQDDLGGEV  60
   61 CKSLLRGESK ETAFFIHGDV RVEDDISNAV DFAVKNFGTL DILINNAGLC GAPCPDIRNY 120
  121 SLSEFEMTFD VNVKGAFLSM KHAARVMIPE KKGSIVSLCS VGGVVGGVGP HSYVGSKHAV 180
  181 LGLTRSVAAE LGQHGIRVNC VSPYAVATKL ALAHLPEEER TEDAFVGFRN FAAANANLKG 240
  241 VELTVDDVAN AVLFLASDDS RYISGDNLMI DGGFTCTNHS FKVFR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..285] PSI-BLAST 46.69897 X-Ray structure of apo-Secoisolariciresinol Dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  3.09625241707629 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  3.06391460989761 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  3.02758902218302 bayes_pls_golite062009
  • retinol dehydrogenase activity
    		•  2.50453100919665 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.01043991420942 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • steroid dehydrogenase activity
    		•  1.75109362865449 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.65338499044318 bayes_pls_golite062009
  • steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.55012034958204 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.47309297191111 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.37100865053801 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  1.23679054027553 bayes_pls_golite062009
  • alcohol binding
    		•  1.07158175924364 bayes_pls_golite062009
  • sorbose reductase activity
    		•  1.06293597394863 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.01627645289834 bayes_pls_golite062009
  • binding
    		•  0.982999356179965 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.767938399969406 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.706900732268048 bayes_pls_golite062009
  • retinal dehydrogenase activity
    		•  0.69372321031969 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.604742541607263 bayes_pls_golite062009
  • 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity
    		•  0.583772223704381 bayes_pls_golite062009
  • DNA binding
    		•  0.525227236870065 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.459537641913493 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.439912268968251 bayes_pls_golite062009
  • retinol binding
    		•  0.343379136183648 bayes_pls_golite062009
  • signal transducer activity
    		•  0.225672688672174 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.225672688672174 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.177044638410302 bayes_pls_golite062009
  • ethanol binding
    		•  0.0448614072391299 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  0.00644214957417527 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle