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Protein Overview: gi|18409620, gi|...

General Information:
Name(s) found: gi|7486000 [NCBI NR]
gi|4886277 [NCBI NR]
gi|30387567 [NCBI NR]
gi|18409620 [NCBI NR]
gi|15450892 [NCBI NR]
gi|14532764 [NCBI NR]
gi|13430562 [NCBI NR]
Description(s) found:
Found 18 descriptions.
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  • pir||T08449 hypothetical protein F22O6.120 - Arabidopsis thaliana [NCBI NR]
  • gi|4886277|emb|CAB43423.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30387567|gb|AAP31949.1| At3g52500 [Arabidopsis thaliana] [NCBI NR]
  • gi|18409620|ref|NP_566966.1| aspartyl protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15450892|gb|AAK96717.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14532764|gb|AAK64083.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13430562|gb|AAK25903.1|AF360193_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 469 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    membrane [IDA]
    plant-type cell wall [IDA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSIFFFFL IFLSVVSAVK LPLSPFSHSD QSPKDPYLSL RRLAESSIAR AHKLKHGTSI  60
   61 KPDEDALSST TTASATVVKS PLSAKSYGGY SVSLSFGTPS QTIPFVFDTG SSLVWLPCTS 120
  121 RYLCSGCDFS GLDPTLIPRF IPKNSSSSKI IGCQSPKCQF LYGPNVQCRG CDPNTRNCTV 180
  181 GCPPYILQYG LGSTAGVLIT EKLDFPDLTV PDFVVGCSII STRQPAGIAG FGRGPVSLPS 240
  241 QMNLKRFSHC LVSRRFDDTN VTTDLDLDTG SGHNSGSKTP GLTYTPFRKN PNVSNKAFLE 300
  301 YYYLNLRRIY VGRKHVKIPY KYLAPGTNGD GGSIVDSGST FTFMERPVFE LVAEEFASQM 360
  361 SNYTREKDLE KETGLGPCFN ISGKGDVTVP ELIFEFKGGA KLELPLSNYF TFVGNTDTVC 420
  421 LTVVSDKTVN PSGGTGPAII LGSFQQQNYL VEYDLENDRF GFAKKKCSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..469] PSI-BLAST 74.154902 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle