Protein Overview: MBF1C_ARATH

General Information:
Name(s) found:	MBF1C_ARATH [Swiss-Prot]
Description(s) found: Found 15 descriptions. SHOW ALL	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C PE=1 SV=1 [Swiss-Prot]
Organism:	Arabidopsis thaliana
Length:	148 amino acids
Gene Ontology:
Cellular Component:	nucleolus [IDA]
Biological Process:	response to heat [IEP] response to abscisic acid stimulus [IEP] transcription [ISS] positive regulation of transcription [TAS] ethylene mediated signaling pathway [TAS] response to ethylene stimulus [ISS] response to water deprivation [IEP]
Molecular Function:	DNA binding [ISS] transcription factor activity [TAS] transcription coactivator activity [IGI][ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSRYPGAVT QDWEPVVLHK SKQKSQDLRD PKAVNAALRN GVAVQTVKKF DAGSNKKGKS  60
   61 TAVPVINTKK LEEETEPAAM DRVKAEVRLM IQKARLEKKM SQADLAKQIN ERTQVVQEYE 120
  121 NGKAVPNQAV LAKMEKVLGV KLRGKIGK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..70]	Pfam	27.455932	No description for PF08523.1 was found. No confident structure predictions are available.
2	View Details	[71..148]	PSI-BLAST	12.221849	C.BclI, Control Element of the BclI Restriction-Modification System

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
DNA binding	5.51228466689923	bayes_pls_golite062009
nucleic acid binding	5.37468811865033	bayes_pls_golite062009
transcription regulator activity	5.05236457497789	bayes_pls_golite062009
transcription factor activity	3.89464979825638	bayes_pls_golite062009
binding	3.66501723413351	bayes_pls_golite062009
sequence-specific DNA binding	3.25218945600666	bayes_pls_golite062009
RNA polymerase II transcription factor activity	3.22754992035091	bayes_pls_golite062009
transcription activator activity	3.15886611325686	bayes_pls_golite062009
transcription repressor activity	1.75958281319075	bayes_pls_golite062009
protein binding	1.55649304400241	bayes_pls_golite062009
chromatin binding	1.2739759748489	bayes_pls_golite062009
transcription factor binding	1.02788976342343	bayes_pls_golite062009
specific RNA polymerase II transcription factor activity	0.92393807212912	bayes_pls_golite062009
transcription cofactor activity	0.8718993114781	bayes_pls_golite062009
transcription coactivator activity	0.81316180547536	bayes_pls_golite062009
promoter binding	0.22765608166458	bayes_pls_golite062009
catalytic activity	0.00446472034106909	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle