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Protein Overview: RMA1_ARATH

General Information:
Name(s) found: RMA1_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana GN=RMA1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 249 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    endoplasmic reticulum [IDA]
    Biological Process: protein exit from endoplasmic reticulum [IMP]
    secretion by cell [IGI]
    ubiquitin-dependent protein catabolic process [IDA]
    Molecular Function: ubiquitin-protein ligase activity [IDA]
    zinc ion binding [ISS]
    protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALDQSFEDA ALLGELYGEG AFCFKSKKPE PITVSVPSDD TDDSNFDCNI CLDSVQEPVV  60
   61 TLCGHLFCWP CIHKWLDVQS FSTSDEYQRH RQCPVCKSKV SHSTLVPLYG RGRCTTQEEG 120
  121 KNSVPKRPVG PVYRLEMPNS PYASTDLRLS QRVHFNSPQE GYYPVSGVMS SNSLSYSAVL 180
  181 DPVMVMVGEM VATRLFGTRV MDRFAYPDTY NLAGTSGPRM RRRIMQADKS LGRIFFFFMC 240
  241 CVVLCLLLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] PSI-BLAST 14.30103 RAG1 DIMERIZATION DOMAIN
    2 View Details [160..249] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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