| Protein: | RMA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 249 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RMA1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
140.0 | [0..30] | [249..23] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MALDQSFEDA ALLGELYGEG AFCFKSKKPE PITVSVPSDD TDDSNFDCNI CLDSVQEPVV 60
61 TLCGHLFCWP CIHKWLDVQS FSTSDEYQRH RQCPVCKSKV SHSTLVPLYG RGRCTTQEEG 120
121 KNSVPKRPVG PVYRLEMPNS PYASTDLRLS QRVHFNSPQ
|
| Detection Method: |  |
| Confidence: | 14.30103 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [160-249] |
1 11 21 31 41 51
| | | | | |
1 EGYYPVSGVM SSNSLSYSAV LDPVMVMVGE MVATRLFGTR VMDRFAYPDT YNLAGTSGPR 60
61 MRRRIMQADK SLGRIFFFFM CCVVLCLLLF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
