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Protein Overview: MYB23_ARATH

General Information:
Name(s) found: MYB23_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|94442501|gb|ABF19038.1| At5g40330 [Arabidopsis thaliana] [NCBI NR]
  • gi|75332916|sp|Q96276.1|MYB23_ARATH RecName: Full=Transcription factor MYB23; AltName: Full=Myb-related protein 23; Short=AtMYB23 [NCBI NR]
  • gi|41619432|gb|AAS10101.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|15242649|ref|NP_198849.1| MYB23 (MYB DOMAIN PROTEIN 23); DNA binding / protein binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|1495253|emb|CAA92281.1| myb-related protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10178143|dbj|BAB11588.1| Myb-related protein [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1 [Swiss-Prot]
  • (Q96276) MYB-related protein [athaliana3702.FASTAC.txt]
  • Myb-related protein [Arabidopsis thaliana]gi|1495253|emb|CAA92281.1| myb-related protein [Arabidopsis thaliana]gi|15242649|ref|NP_198849.1| myb family transcription factor [Arabidopsis thaliana]gi|41619432|gb|AAS10101.1| MYB transcription factor [Arabi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATMYBRTF, ATMYB23, MYB23 | MYB23 (myb domain protein 23); DNA binding / transcription factor | chr5:16145077-16146696 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • MYB23; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Myb-related protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g40330 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • myb-related protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MYB23, ATMYB23, ATMYBRTF | myb domain protein 23 | chr5:16127849-16129468 FORWARD LENGTH=219 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 219 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: root epidermal cell differentiation [IMP]
    trichome branching [IMP]
    regulation of transcription [TAS]
    trichome patterning [IGI]
    trichome differentiation [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMTRDGKEH EYKKGLWTVE EDKILMDYVR THGQGHWNRI AKKTGLKRCG KSCRLRWMNY  60
   61 LSPNVNRGNF TDQEEDLIIR LHKLLGNRWS LIAKRVPGRT DNQVKNYWNT HLSKKLGLGD 120
  121 HSTAVKAACG VESPPSMALI TTTSSSHQEI SGGKNSTLRF DTLVDESKLK PKSKLVHATP 180
  181 TDVEVAATVP NLFDTFWVLE DDFELSSLTM MDFTNGYCL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 29.0 c-Myb, DNA-binding domain
    2 View Details [119..219] MSA 1.521995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle