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Protein Overview: gi|15218623, gi|...

General Information:
Name(s) found: gi|5903079 [NCBI NR]
gi|25406229 [NCBI NR]
gi|23198014 [NCBI NR]
gi|22531188 [NCBI NR]
gi|15218623 [NCBI NR]
Description(s) found:
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  • gi|5903079|gb|AAD55637.1|AC008017_10 Similar to part of disease resistance protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B96754 Similar to part of disease resistance protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|23198014|gb|AAN15534.1| virus resistance protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|22531188|gb|AAM97098.1| virus resistance protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15218623|ref|NP_177433.1| disease resistance protein (TIR-NBS class), putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9SSN6) Similar to part of disease resistance protein (Virus resistance protein, putative) [athaliana3702.FASTAC.txt]
  • virus resistance protein, putative [Arabidopsis thaliana]gi|22531188|gb|AAM97098.1| virus resistance protein, putative [Arabidopsis thaliana]gi|5903079|gb|AAD55637.1| Similar to part of disease resistance protein [Arabidopsis thaliana]gi|25406229|pir|| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Disease resistance protein (TIR-NBS class) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | disease resistance protein (TIR-NBS class), putative | chr1:27435877-27437193 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • virus resistance protein, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Similar to part of disease resistance protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transmembrane receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing protein | chr1:27432216-27433532 FORWARD LENGTH=363 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Similar to part of disease resistance protein OS=Arabidopsis thaliana GN=F3N23.10 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    defense response [ISS]
    Molecular Function: transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSATATYNY DVFLSFRGPD TRRKFISFLY KELVGRDIRT FKDDKELENG QMISPELILA  60
   61 IEDSRFAVVV VSVNYAASSW CLDELVKIMD IQKNKGSITV MPIFYGVNPC HLRRQIGDVA 120
  121 EQFKKHEARE KDLEKVLKWR QALAALADIS GDCSGEDDSK LVDVIADKIS KELMIVTRIS 180
  181 NGRNLVGIDK HMNELNRLMD LNSNKGKRMV GIWARGGSCR SALAKYVYQT SCQHFDSHCF 240
  241 LGNVKRICQG NYFESHLHKE FLDNIQGENS SKQSLKKQKV LLVADDVDKL EQLDALAGDF 300
  301 SGFGPGSVVI ITTKDKQLLI SYGIQLVYEA EFLTFQKFCR SFRSLAFKKR DDISAAFEWA 360
  361 LYI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] FFAS03 4.1 Structure of the apoptotic protease-activating factor 1 bound to ADP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle