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Protein Overview: HTH_ARATH

General Information:
Name(s) found: HTH_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 594 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [ISS]
    Biological Process: cell-cell signaling [IMP]
    embryo sac development [IMP]
    fatty acid omega-oxidation [IMP]
    Molecular Function: aldehyde-lyase activity [ISS]
    mandelonitrile lyase activity [ISS]
    FAD binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKLFLFAL LLCLPTSLSS TASKGKEKKS KFNPYRYTFI DKASTFSSSS SSSFSSNGQD  60
   61 SSYDYIVIGG GTAGCPLAAT LSQNFSVLVL ERGGVPFTNA NVSFLRNFHI GLADISASSA 120
  121 SQAFVSTDGV YNARARVLGG GSCINAGFYS RADAAFVKRA GWDPKLVKES YPWVEREIVH 180
  181 QPKLTLWQKA LRDSLLEVGV RPFNGFTYDH VSGTKIGGTI FDRFGRRHTA AELLAYANPQ 240
  241 KLRVLIYATV QKIVFDTSGT RPRVTGVIFK DEKGNQHQAL LSNRKGSEVI LSSGAIGSPQ 300
  301 MLMLSGIGPK KELQRLKIPV VLENEHVGKG MADNPMNTIL VPSKAPIEQS LIQTVGITKM 360
  361 GVYVEASTGF GQSPESIHTH YGIMSNKNEL FSTIPAKQRR PEATQAYITR NKYQLHEAFN 420
  421 GSFILEKLAY PISRGHLSLV NTNVDDNPSV TFNYFKHPVD LQRCVEAIRL VSKVVTSNRF 480
  481 LNYTQCDKQN VHKMLSLSVK ANINLRPKQL NDTKSMAQFC KDTVVTIWHY HGGCLVGKVV 540
  541 SPNRKVLGVD RLRVIDGSTF DESPGTNPQA TMMMMGRYMG VKILRERLGN KAGV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..594] PSI-BLAST 87.69897 Hydroxynitrile lyase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • choline dehydrogenase activity
    		•  4.66965094791663 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  4.10319574017291 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.3417445147889 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.47575323060551 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • binding
    		•  0.850689563354756 bayes_pls_golite062009
  • monooxygenase activity
    		•  0.72374980280274 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.442625746935807 bayes_pls_golite062009
  • protein binding
    		•  0.370064403093958 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  0.242456601435627 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.170082356807927 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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