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Protein Overview: gi|20196906, gi|...

General Information:
Name(s) found: gi|34098899 [NCBI NR]
gi|25083323 [NCBI NR]
gi|21553359 [NCBI NR]
gi|20196906 [NCBI NR]
gi|18403429 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • gi|34098899|gb|AAQ56832.1| At2g34040 [Arabidopsis thaliana] [NCBI NR]
  • gi|25083323|gb|AAN72062.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21553359|gb|AAM62452.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|20196906|gb|AAB67622.2| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18403429|ref|NP_565777.1| apoptosis inhibitory 5 (API5) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 553 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: anti-apoptosis [ISS]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENQSEEVQ QIEKLYEFSE RLNASKDKSQ NVEDYEGIIK MSKTSMKAKQ LASQLIPRYF  60
   61 KFFPSLSTEA FDAHMDCIDD GDLGVRVQAI RGLPLFCKDT PDILSKIVDV LVQLLNTEEP 120
  121 VERDAVHKAL MSLLRQDPKA SSTALFTHAG VTPTTDDQIR EKVLNFIRDK VIPLKGELLK 180
  181 PQEEMERHIT DLIKQSLEDV TGGEFKMFMD FLTSLSIFGG KAPPERMQEL VEIIEGQADL 240
  241 NAQFEFSDTD HIDRLISCLQ LALPFFARGA PSSRFLIYLN KHIIPVFDKL PEERKLDLLK 300
  301 ALADISPYTT AQEARQLLPS IVELLKIYMP ARKTGEEMNF TYVECLLYAF HHLAHKVPNA 360
  361 TNSLCGYKIV TGQPSDRLGE DFSELNKDFT ERLTIVEDLT KATMKKLTQG MTEHNKAMSA 420
  421 AKTDEEKASI KTKRQNTTTG LRTCNNILAM TKPLHAKVPP FIGDTNLNLS WKEATKPLAS 480
  481 TTTTIGGKRP ANSNNGSGNN VAAKKGRGSG TMQNQLVNKA FEGISSYGAG RGGNRGWGRR 540
  541 GGGRGRGQGR GHW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..553] FFAS03 2.21 Adaptin beta subunit N-terminal fragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.96084803796407 bayes_pls_golite062009
  • protein binding
    		•  1.61131270705552 bayes_pls_golite062009
  • RNA binding
    		•  1.15651342367417 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.957118339467874 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.409399311301148 bayes_pls_golite062009
  • DNA binding
    		•  0.318557071875052 bayes_pls_golite062009
  • structural molecule activity
    		•  0.199205758461236 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle