| Protein: | gi|20196906, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 553 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20196906, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
858.0 | [0..1] | [524..1] |
|
Region A: Residues: [1-553] |
1 11 21 31 41 51
| | | | | |
1 MSENQSEEVQ QIEKLYEFSE RLNASKDKSQ NVEDYEGIIK MSKTSMKAKQ LASQLIPRYF 60
61 KFFPSLSTEA FDAHMDCIDD GDLGVRVQAI RGLPLFCKDT PDILSKIVDV LVQLLNTEEP 120
121 VERDAVHKAL MSLLRQDPKA SSTALFTHAG VTPTTDDQIR EKVLNFIRDK VIPLKGELLK 180
181 PQEEMERHIT DLIKQSLEDV TGGEFKMFMD FLTSLSIFGG KAPPERMQEL VEIIEGQADL 240
241 NAQFEFSDTD HIDRLISCLQ LALPFFARGA PSSRFLIYLN KHIIPVFDKL PEERKLDLLK 300
301 ALADISPYTT AQEARQLLPS IVELLKIYMP ARKTGEEMNF TYVECLLYAF HHLAHKVPNA 360
361 TNSLCGYKIV TGQPSDRLGE DFSELNKDFT ERLTIVEDLT KATMKKLTQG MTEHNKAMSA 420
421 AKTDEEKASI KTKRQNTTTG LRTCNNILAM TKPLHAKVPP FIGDTNLNLS WKEATKPLAS 480
481 TTTTIGGKRP ANSNNGSGNN VAAKKGRGSG TMQNQLVNKA FEGISSYGAG RGGNRGWGRR 540
541 GGGRGRGQGR GHW
|
| Detection Method: |  |
| Confidence: | 2.21 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.96084803796407 | bayes_pls_golite062009 |
| protein binding | 1.61131270705552 | bayes_pls_golite062009 |
| RNA binding | 1.15651342367417 | bayes_pls_golite062009 |
| nucleic acid binding | 0.957118339467874 | bayes_pls_golite062009 |
| transcription regulator activity | 0.409399311301148 | bayes_pls_golite062009 |
| DNA binding | 0.318557071875052 | bayes_pls_golite062009 |
| structural molecule activity | 0.199205758461236 | bayes_pls_golite062009 |
