YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|6899918, gi|1...

General Information:
Name(s) found: gi|6899918 [NCBI NR]
gi|23297253 [NCBI NR]
gi|18412245 [NCBI NR]
gi|11358072 [NCBI NR]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • gi|6899918|emb|CAB71868.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23297253|gb|AAN12925.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18412245|ref|NP_567125.1| SNF7 family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T48000 hypothetical protein T17J13.40 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein transport [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPEAVKEFI RREVPDWDDE VVAMARFKAF SGQRSDWELK FQFWRDLIIK VSRQFGLFII  60
   61 DPVQVKKAWF DRGGMTPLCI DDVVLLMHSE GDVVRISDLD DPGSGRIARL LRTVKNLMVQ 120
  121 QPVKQEEILE NTLVLVPLLK EKAADVVKIL SEGHWTSTCV VTLKKFRNLC NGSNEASAVL 180
  181 SHLSGCGKAH KISINRGELI EGVKVSFSQT ALPGISTLDC DILHLLRTTE KLQDQLEVMD 240
  241 QRCEKSKKSA LASLKSGHRK VALRHARELK VVTESREKCT SLLNRVEEVL NTIADSESTK 300
  301 MVSEAIKTGA RVMKDIKISA DDVHDYLEEL EETIESQKQV EKALESAPYP DIDDEDIEEE 360
  361 LLELEMDLES ESSQVLPATS DTADSLTEMF SELKLGKTKQ TLEEQATEPA QMKDSGKKIL 420
  421 EAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] FFAS03 0.972 Structure of the ESCRT-II endosomal trafficking complex
    2 View Details [101..423] PSI-BLAST 19.154902 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.683379929086364 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.16959343932447 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0949481158963694 bayes_pls_golite062009
  • DNA binding
    		•  0.00746597740509714 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle