| Protein: | gi|6899918, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 423 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6899918, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
247.0 | [0..1] | [423..1] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MDPEAVKEFI RREVPDWDDE VVAMARFKAF SGQRSDWELK FQFWRDLIIK VSRQFGLFII 60
61 DPVQVKKAWF DRGGMTPLCI DDVVLLMHSE GDVVRISDLD
|
| Detection Method: |  |
| Confidence: | 0.972 |
| Match: | 1u5tC |
| Description: | Structure of the ESCRT-II endosomal trafficking complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.683379929086364 | bayes_pls_golite062009 |
| transcription regulator activity | 0.16959343932447 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0949481158963694 | bayes_pls_golite062009 |
| DNA binding | 0.00746597740509714 | bayes_pls_golite062009 |
|
Region A: Residues: [101-423] |
1 11 21 31 41 51
| | | | | |
1 DPGSGRIARL LRTVKNLMVQ QPVKQEEILE NTLVLVPLLK EKAADVVKIL SEGHWTSTCV 60
61 VTLKKFRNLC NGSNEASAVL SHLSGCGKAH KISINRGELI EGVKVSFSQT ALPGISTLDC 120
121 DILHLLRTTE KLQDQLEVMD QRCEKSKKSA LASLKSGHRK VALRHARELK VVTESREKCT 180
181 SLLNRVEEVL NTIADSESTK MVSEAIKTGA RVMKDIKISA DDVHDYLEEL EETIESQKQV 240
241 EKALESAPYP DIDDEDIEEE LLELEMDLES ESSQVLPATS DTADSLTEMF SELKLGKTKQ 300
301 TLEEQATEPA QMKDSGKKIL EAA
|
| Detection Method: | |
| Confidence: | 19.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
