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Protein Overview: SCP42_ARATH

General Information:
Name(s) found: SCP42_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: serine-type carboxypeptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS  60
   61 LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP FYPTGDGRGL RVNSMSWNKA 120
  121 SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY 180
  181 AGHYIPQLAD AILSYNSHSS GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK 240
  241 LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL 300
  301 KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID 360
  361 MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ DLNFKTTVPY GAWFHKSQVG 420
  421 GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..473] PSI-BLAST 115.0 Human 'protective protein', HPP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.09944423676394 bayes_pls_golite062009
  • peptidase activity
    		•  2.49064988313037 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.10044305272656 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  1.3250951453762 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43631945855397 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.264183693934251 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.22327746138619 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.1174692258176 bayes_pls_golite062009
  • binding
    		•  0.112743564301567 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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