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Protein Overview: RK1_ARATH

General Information:
Name(s) found: RK1_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • 50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    nucleus [IDA]
    chloroplast [IDA]
    membrane [IDA]
    ribosome [ISS]
    chloroplast thylakoid membrane [IDA]
    Biological Process: RNA processing [IEA]
    translation [IEA][ISS]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAACATHSSL MLAYAAASTR SQDLTPTPSL FSFASSRPNH LSFPLLLLGG SRDRRCAAID  60
   61 RASNHKFIVS AVAAEADLDT EEDLEQTATA VLDPPKPKKG KAALVLKRDR TRSKRFLEIQ 120
  121 KLRETKKEYD VNTAISLLKQ TANTRFVESV EAHFRLNIDP KYNDQQLRAT VSLPKGTGQT 180
  181 VIVAVLAQGE KVDEAKSAGA DIVGSDDLIE QIKGGFMEFD KLIASPDMMV KVAGLGKILG 240
  241 PRGLMPNPKA GTVTANIPQA IEEFKKGKVE FRADKTGIVH IPFGKVNFTE EDLLINFLAA 300
  301 VKSVETNKPK GAKGVYWKSA HICSSMGPSI KLNIREMIDF KPPTAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] MSA 1.044994 View MSA. No confident structure predictions are available.
    2 View Details [102..346] PSI-BLAST 75.30103 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.98821526471491 bayes_pls_golite062009
  • structural molecule activity
    		•  9.4110731269774 bayes_pls_golite062009
  • binding
    		•  1.37133122073906 bayes_pls_golite062009
  • protein binding
    		•  0.335149649581279 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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