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Protein Overview: PUB17_ARATH

General Information:
Name(s) found: PUB17_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 729 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [IEA]
    Biological Process: defense response to fungus, incompatible interaction [IGI]
    defense response, incompatible interaction [IMP]
    apoptosis [IGI]
    protein ubiquitination [IDA]
    Molecular Function: ubiquitin-protein ligase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAAIFSSL RRRRSPSLEA FLAPVDLSGV ALVQTLASIS SEVVSCFTSV RFSFQRKNAR  60
   61 SLIRKIEIFV VLFEFLVDSN WGSTTTRTRA RRRSKSSVSE STALLCLKEL YLLLYRSKIL 120
  121 VDYCAQSSKL WLLLQNPSIS GYFHDLNQEI STLLDVLPVN DLGLSDDIRE QIELLQRQSR 180
  181 KARLYIDKND ESLRESFYSF LDGFENGKIP SSVDLRMFFV EKLGIRDSKS CRSEIEFLEE 240
  241 QIVNHDGDLE PTGSVINGFV AITRYCRFLL FGFEEDGMEW WIENNPKKPR KGFVAQEIGD 300
  301 TFITVPKDFV CPISLDLMTD PVIISTGQTY DRNSIARWIE EGHCTCPKTG QMLMDSRIVP 360
  361 NRALKNLIVQ WCTASGISYE SEFTDSPNES FASALPTKAA VEANKATVSI LIKYLADGSQ 420
  421 AAQTVAAREI RLLAKTGKEN RAYIAEAGAI PHLCRLLTSE NAIAQENSVT AMLNLSIYEK 480
  481 NKSRIMEEGD CLESIVSVLV SGLTVEAQEN AAATLFSLSA VHEYKKRIAI VDQCVEALAL 540
  541 LLQNGTPRGK KDAVTALYNL STHPDNCSRM IEGGGVSSLV GALKNEGVAE EAAGALALLV 600
  601 RQSLGAEAIG KEDSAVAGLM GMMRCGTPRG KENAVAALLE LCRSGGAAVA EKVLRAPAIA 660
  661 GLLQTLLFTG TKRARRKAAS LARVFQRREN AAMRSGVYGF VGNTNGNRDG GFTTDVSVPI 720
  721 SISISVPVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] MSA 1.216988 View MSA. No confident structure predictions are available.
    2 View Details [227..300] MSA 2.500997 View MSA. Confident ab initio structure predictions are available.
    3 View Details [301..375] PSI-BLAST 10.0 NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana
    4 View Details [376..729] PSI-BLAST 43.522879 Structure of the Kap60p:Nup2 complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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