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Protein Overview: CCL11_ARATH

General Information:
Name(s) found: CCL11_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to salt stress [IDA]
    regulation of cell cycle [ISS]
    regulation of transcription [TAS]
    Molecular Function: cyclin-dependent protein kinase regulator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ  60
   61 VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ VIIVFHRMEC RRENLPLEHL 120
  121 DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN 180
  181 DSLRTTLCVR FRSEVVACGV VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY 240
  241 SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM 300
  301 VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR 360
  361 DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS RDRDYRDSSK DRRRHH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..272] PSI-BLAST 47.522879 No description for 2i53A was found.
    2 View Details [273..416] MSA 13.132997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cyclin-dependent protein kinase regulator activity
    		•  6.12919068656167 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  4.69539052135726 bayes_pls_golite062009
  • protein kinase regulator activity
    		•  2.90083336559452 bayes_pls_golite062009
  • kinase regulator activity
    		•  2.84789294954357 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.795846725429 bayes_pls_golite062009
  • binding
    		•  2.4204867358489 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.04886889839181 bayes_pls_golite062009
  • DNA binding
    		•  1.94297811210385 bayes_pls_golite062009
  • protein binding
    		•  1.47106731485576 bayes_pls_golite062009
  • kinase activity
    		•  1.38878672278174 bayes_pls_golite062009
  • transcription factor activity
    		•  1.21921365719206 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.13015830171495 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.12685411405053 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.09952334871968 bayes_pls_golite062009
  • protein kinase activity
    		•  0.957590284872001 bayes_pls_golite062009
  • transcription factor binding
    		•  0.749278791251235 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.729629809946521 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.567809158275482 bayes_pls_golite062009
  • transferase activity
    		•  0.532488713136535 bayes_pls_golite062009
  • kinase binding
    		•  0.451409627821468 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
    		•  0.15005807834588 bayes_pls_golite062009
  • enzyme binding
    		•  0.145967754156613 bayes_pls_golite062009
  • transcription coactivator activity
    		•  0.138191616709499 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0696060248241566 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle