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Protein Overview: AMT15_ARATH

General Information:
Name(s) found: AMT15_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15230090|ref|NP_189072.1| AMT1;5 (AMMONIUM TRANSPORTER 1;5); ammonium transmembrane transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|11994690|dbj|BAB02928.1| ammonium transporter [Arabidopsis thaliana] [NCBI NR]
  • Putative ammonium transporter 1 member 5 OS=Arabidopsis thaliana GN=AMT1-5 PE=3 SV=1 [Swiss-Prot]
  • (Q9LK16) Ammonium transporter [athaliana3702.FASTAC.txt]
  • ammonium transporter [Arabidopsis thaliana]gi|15230090|ref|NP_189072.1| ammonium transporter, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ammonium transporter [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ammonium transporter, putative | chr3:8801407-8802897 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ammonium transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AMT1;5 | ammonium transporter 1;5 | chr3:8801400-8802890 REVERSE LENGTH=496 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 496 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    endomembrane system [IEA]
    Biological Process: ammonium transport [IDA]
    transport [ISS]
    Molecular Function: ammonium transmembrane transporter activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAITCSAA DLSALLGPNA TAAADYICGQ LGSVNNKFTD AAYAIDNTYL LFSAYLVFAM  60
   61 QLGFAMLCAG SVRAKNTMNI MLTNVLDAAA GGLFYYLFGY AFAFGESSDG FIGRHNFGLQ 120
  121 NFPTLTSDYS FFLYQWAFAI AAAGITSGSI AERTKFVAYL IYSSFLTGFV YPVVSHWFWS 180
  181 PDGWASPFRS EDRLFGTGAI DFAGSGVVHM VGGIAGLWGA LIEGPRIGRF PDGGHAIALR 240
  241 GHSASLVVLG TFLLWFGWYG FNPGSFTKIL IPYNSGSNYG QWSGIGRTAV TTTLSGCTAA 300
  301 LTTLFGKRLL SGHWNVTDVC NGLLGGFAAI TAGCSVVDPW AAIVCGFVAS LVLIGCNKLA 360
  361 ELLKYDDPLE AAQLHGGCGA WGLIFVGLFA KEKYINEVYG ASPGRHYGLF MGGGGKLLGA 420
  421 QLVQIIVIVG WVSATMGTLF FILKKLNLLR ISEQHEMRGM DLAGHGGFAY IYHDNDDDSI 480
  481 GVPGSPVPRA PNPPAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..496] PSI-BLAST 90.69897 The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ammonium transmembrane transporter activity
    		•  10.0624820335928 bayes_pls_golite062009
  • organic cation transmembrane transporter activity
    		•  9.07420898067257 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  7.57181833547312 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  7.46308808953548 bayes_pls_golite062009
  • methylammonium transmembrane transporter activity
    		•  7.38326654060024 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  7.08971867997216 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  7.03159982829686 bayes_pls_golite062009
  • transporter activity
    		•  5.3870893301235 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  5.3046132351753 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  5.16067985999244 bayes_pls_golite062009
  • high affinity secondary active ammonium transmembrane transporter activity
    		•  3.56825523857899 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.81164277777293 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.08017669832334 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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