YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|21592744, gi|...

General Information:
Name(s) found: gi|7543909 [NCBI NR]
gi|21592744 [NCBI NR]
gi|21280863 [NCBI NR]
gi|15810515 [NCBI NR]
gi|15240625 [NCBI NR]
gi|11358882 [NCBI NR]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • gi|7543909|emb|CAB87149.1| transaldolase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21592744|gb|AAM64693.1| transaldolase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21280863|gb|AAM45123.1| putative transaldolase [Arabidopsis thaliana] [NCBI NR]
  • gi|15810515|gb|AAL07145.1| putative transaldolase [Arabidopsis thaliana] [NCBI NR]
  • gi|15240625|ref|NP_196846.1| transaldolase, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||T48589 transaldolase-like protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    mitochondrion [IDA]
    Biological Process: response to cadmium ion [IEP]
    Molecular Function: transaldolase activity [IEA][ISS]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATISNLANL PRATCVDSKS SSSSSVLPRS FVNFRALNAK LSSSQLSLRY NQRSIPSLSV  60
   61 RCSVSGGNGT AGKRTTLHDL YEKEGQSPWY DNLCRPVTDL LPLIARGVRG VTSNPAIFQK 120
  121 AISTSNAYND QFRTLVESGK DIESAYWELV VKDIQDACKL FEPIYDQTEG ADGYVSVEVS 180
  181 PRLADDTQGT VEAAKYLSKV VNRRNVYIKI PATAPCIPSI RDVIAAGISV NVTLIFSIAR 240
  241 YEAVIDAYLD GLEASGLDDL SRVTSVASFF VSRVDTLMDK MLEQIGTPEA LDLRGKAAVA 300
  301 QAALAYKLYQ QKFSGPRWEA LVKKGAKKQR LLWASTSVKN PAYSDTLYVA PLIGPDTVST 360
  361 MPDQALEAFA DHGIVKRTID ANVSEAEGIY SALEKLGIDW NKVGEQLEDE GVDSFKKSFE 420
  421 SLLGTLQDKA NTLKLASH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..438] PSI-BLAST 100.0 Transaldolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  3.04075198078553 bayes_pls_golite062009
  • transaldolase activity
    		•  2.95163083262429 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  2.76354434128623 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  1.58944646264115 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.85265356790496 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.57490435505339 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.46995661155228 bayes_pls_golite062009
  • lyase activity
    		•  0.437176828950096 bayes_pls_golite062009
  • porphobilinogen synthase activity
    		•  0.3109818510519 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle