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View Structure Prediction Details

Protein: gi|21592744, gi|...
Organism: Arabidopsis thaliana
Length: 438 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592744, gi|....

Description E-value Query
Range
Subject
Range
gi|77999311 - gi|77999311|gb|ABB17002.1| transaldolase-like protein [Solanum tuberosum]
427.0 [0..1] [437..1]

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Predicted Domain #1
Region A:
Residues: [1-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATISNLANL PRATCVDSKS SSSSSVLPRS FVNFRALNAK LSSSQLSLRY NQRSIPSLSV  60
   61 RCSVSGGNGT AGKRTTLHDL YEKEGQSPWY DNLCRPVTDL LPLIARGVRG VTSNPAIFQK 120
  121 AISTSNAYND QFRTLVESGK DIESAYWELV VKDIQDACKL FEPIYDQTEG ADGYVSVEVS 180
  181 PRLADDTQGT VEAAKYLSKV VNRRNVYIKI PATAPCIPSI RDVIAAGISV NVTLIFSIAR 240
  241 YEAVIDAYLD GLEASGLDDL SRVTSVASFF VSRVDTLMDK MLEQIGTPEA LDLRGKAAVA 300
  301 QAALAYKLYQ QKFSGPRWEA LVKKGAKKQR LLWASTSVKN PAYSDTLYVA PLIGPDTVST 360
  361 MPDQALEAFA DHGIVKRTID ANVSEAEGIY SALEKLGIDW NKVGEQLEDE GVDSFKKSFE 420
  421 SLLGTLQDKA NTLKLASH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1f05A
Description: Transaldolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 3.04075198078553 bayes_pls_golite062009
transaldolase activity 2.95163083262429 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 2.76354434128623 bayes_pls_golite062009
fructose-bisphosphate aldolase activity 1.58944646264115 bayes_pls_golite062009
aldehyde-lyase activity 0.85265356790496 bayes_pls_golite062009
carbon-carbon lyase activity 0.57490435505339 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 0.46995661155228 bayes_pls_golite062009
lyase activity 0.437176828950096 bayes_pls_golite062009
porphobilinogen synthase activity 0.3109818510519 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle