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Protein Overview: APA3_ARATH

General Information:
Name(s) found: APA3_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Aspartic proteinase A3 OS=Arabidopsis thaliana GN=APA3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 508 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [ISS]
    response to cadmium ion [IDA]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTRFQSFLL VFLLSCLILI STASCERNGD GTIRIGLKKR KLDRSNRLAS QLFLKNRGSH  60
   61 WSPKHYFRLN DENADMVPLK NYLDAQYYGD ITIGTPPQKF TVIFDTGSSN LWIPSTKCYL 120
  121 SVACYFHSKY KASQSSSYRK NGKPASIRYG TGAISGYFSN DDVKVGDIVV KEQEFIEATS 180
  181 EPGITFLLAK FDGILGLGFK EISVGNSTPV WYNMVEKGLV KEPIFSFWLN RNPKDPEGGE 240
  241 IVFGGVDPKH FKGEHTFVPV THKGYWQFDM GDLQIAGKPT GYCAKGCSAI ADSGTSLLTG 300
  301 PSTVITMINH AIGAQGIVSR ECKAVVDQYG KTMLNSLLAQ EDPKKVCSQI GVCAYDGTQS 360
  361 VSMGIQSVVD DGTSGLLNQA MCSACEMAAV WMESELTQNQ TQERILAYAA ELCDHIPTQN 420
  421 QQSAVDCGRV SSMPIVTFSI GGRSFDLTPQ DYIFKIGEGV ESQCTSGFTA MDIAPPRGPL 480
  481 WILGDIFMGP YHTVFDYGKG RVGFAKAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..508] PSI-BLAST 108.0 (Pro)phytepsin; Plant acid proteinase, phytepsin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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