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Protein Overview: gi|224589481, gi...

General Information:
Name(s) found: gi|25406183 [NCBI NR]
gi|224589481 [NCBI NR]
gi|15218494 [NCBI NR]
gi|12325265 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||G96748 hypothetical protein T10D10.7 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|224589481|gb|ACN59274.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15218494|ref|NP_177390.1| leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12325265|gb|AAG52572.1|AC016529_3 putative receptor-like protein kinase; 33719-31696 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [ISS]
    protein serine/threonine kinase activity [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAWLIWPI VLSLTALSAN SITESESLLK FKKSLNNTKS LDSWTPESEP CGASQRWIGL  60
   61 LCNKNSVFGL QIEQMGLSGK VDVAPLKDLP SLRTISIMNN SFSGDIPEFN RLTALKSLYI 120
  121 SGNRFSGNIP SDYFETMVSL KKAWLSNNHF SGLIPISLAT TLPNLIELRL ENNQFIGSIP 180
  181 NFTQTTLAIV DLSNNQLTGE IPPGLLKFDA KTFAGNSGLC GAKLSTPCPQ PKNSTASITI 240
  241 EGTMKDANKS KYFLAFSTLG VLLIVVLVSL AFRKKKKKRR RKKARRTSEQ DNSDDQQIQV 300
  301 TVEGSNSSRQ SRSSRSGELN KGVAGTSDLV MVNKEKGVFR LSDLMKAAAH VLGNPGGGSN 360
  361 RPRSSGGVGS AYKAVLSNGV TVVVKRVTVM NQVSVDVFDK EIRKLGSLQH KNVLTPLAYH 420
  421 FRQDEKLLVF EFVPNLNLLH RLHGDHEEFQ LDWPSRLKII QGIARGMWYL HRELGFLNLP 480
  481 HGNLKSSNIF LAEDGEPLIS EFGLQKLINP DAQSQSLVAF KSPEADRDGT VSAKSDVFSF 540
  541 GVVVLEILTG KFPSQYAGLN RAGGANLVEW LGSALEQGGW MDLLHPMVVT AAAEDKIMEE 600
  601 EIENVLRIGV RCTREDPDQR PNMTEVVDEL TIEDSNDDFI TIET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..301] PSI-BLAST 15.221849 Polygalacturonase inhibiting protein PGIP
    2 View Details [302..366] FFAS03 1.86 No description for 2qkwB was found.
    3 View Details [367..644] PSI-BLAST 64.30103 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • receptor activity
    		•  2.44108148686445 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.25077658159974 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • kinase activity
    		•  1.11577341189523 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.04507575991279 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.370391722473665 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.154501444195573 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle