| Protein: | gi|224589481, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 644 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|224589481, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
360.0 | [0..2] | [644..427] |
|
Region A: Residues: [1-301] |
1 11 21 31 41 51
| | | | | |
1 MAVAWLIWPI VLSLTALSAN SITESESLLK FKKSLNNTKS LDSWTPESEP CGASQRWIGL 60
61 LCNKNSVFGL QIEQMGLSGK VDVAPLKDLP SLRTISIMNN SFSGDIPEFN RLTALKSLYI 120
121 SGNRFSGNIP SDYFETMVSL KKAWLSNNHF SGLIPISLAT TLPNLIELRL ENNQFIGSIP 180
181 NFTQTTLAIV DLSNNQLTGE IPPGLLKFDA KTFAGNSGLC GAKLSTPCPQ PKNSTASITI 240
241 EGTMKDANKS KYFLAFSTLG VLLIVVLVSL AFRKKKKKRR RKKARRTSEQ DNSDDQQIQV 300
301 T
|
| Detection Method: |  |
| Confidence: | 15.221849 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| receptor activity | 2.44108148686445 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.25077658159974 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.16530645523007 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| kinase activity | 1.11577341189523 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.04507575991279 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| nucleic acid binding | 0.370391722473665 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.154501444195573 | bayes_pls_golite062009 |
|
Region A: Residues: [302-366] |
1 11 21 31 41 51
| | | | | |
1 VEGSNSSRQS RSSRSGELNK GVAGTSDLVM VNKEKGVFRL SDLMKAAAHV LGNPGGGSNR 60
61 PRSSG
|
| Detection Method: | |
| Confidence: | 1.86 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
|
Region A: Residues: [367-644] |
1 11 21 31 41 51
| | | | | |
1 GVGSAYKAVL SNGVTVVVKR VTVMNQVSVD VFDKEIRKLG SLQHKNVLTP LAYHFRQDEK 60
61 LLVFEFVPNL NLLHRLHGDH EEFQLDWPSR LKIIQGIARG MWYLHRELGF LNLPHGNLKS 120
121 SNIFLAEDGE PLISEFGLQK LINPDAQSQS LVAFKSPEAD RDGTVSAKSD VFSFGVVVLE 180
181 ILTGKFPSQY AGLNRAGGAN LVEWLGSALE QGGWMDLLHP MVVTAAAEDK IMEEEIENVL 240
241 RIGVRCTRED PDQRPNMTEV VDELTIEDSN DDFITIET
|
| Detection Method: | |
| Confidence: | 64.30103 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
