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Protein Overview: SRF6_ARATH

General Information:
Name(s) found: SRF6_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 719 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [IEA][ISS]
    protein tyrosine kinase activity [IEA]
    protein binding [IEA]
    protein kinase activity [IEA]
    protein serine/threonine kinase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRENWAVVAL FTLCIVGFEL RFIHGATDAS DTSALNTLFS GMHSPAQLTQ WTAAAGDPCG  60
   61 QNWRGVTCSG SRVTQIKLSG LELSGTLGGY MLDKLTSLTE LDLSSNNLGG DLPYQFPPNL 120
  121 QRLNLANNQF TGAASYSLSQ ITPLKYLNLG HNQFKGQIAI DFSKLDSLTT LDFSFNSFTN 180
  181 SLPATFSSLT SLKSLYLQNN QFSGTVDVLA GLPLETLNIA NNDFTGWIPS SLKGITLIKD 240
  241 GNSFNTGPAP PPPPGTPPIR GSPSRKSGGR ESRSSDESTR NGDSKKSGIG AGAIAGIIIS 300
  301 LLVVTALLVA FFLFRRKKSK RSSPMDIEKT DNQPFTLASN DFHENNSIQS SSSVETKKLD 360
  361 TSLSINLRPP PIDRNKSFDD EDSTRKPIAV KKSTVVVPSN VRLYSVADLQ IATGSFSVDN 420
  421 LLGEGTFGRV YRAEFDDGKV LAVKKIDSSA LPHGMTDDFI EMVSKIANLD HPNVTKLVGY 480
  481 CAEHGQHLVV YEFHKNGSLH DFLHLSEEES KALVWNSRVK IALGTARALE YLHEVCSPSI 540
  541 VDKNIKSANI LLDSELNPHL SDSGLASFLP TANELLNQTD EGYSAPEVSM SGQYSLKSDI 600
  601 YSFGVVMLEL LTGRKPFDST RSRSEQSLVR WATPQLHDID ALAKMVDPAL KGLYPVKSLS 660
  661 RFADVIALCV QPEPEFRPPM SEVVQALVVL VQRANMSKRT VGVDPSQRAG SADTTSDYM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..392] PSI-BLAST 15.522879 Polygalacturonase inhibiting protein PGIP
    2 View Details [393..719] PSI-BLAST 67.221849 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • protein binding
    		•  1.69661396118522 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.17568458983071 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • kinase activity
    		•  1.11577341189523 bayes_pls_golite062009
  • receptor activity
    		•  0.823142813332745 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.569410390698942 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • signal transducer activity
    		•  0.405945668463821 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.405945668463821 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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