| Protein: | SRF6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 719 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRF6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
392.0 | [0..3] | [707..166] |
|
Region A: Residues: [1-392] |
1 11 21 31 41 51
| | | | | |
1 MRENWAVVAL FTLCIVGFEL RFIHGATDAS DTSALNTLFS GMHSPAQLTQ WTAAAGDPCG 60
61 QNWRGVTCSG SRVTQIKLSG LELSGTLGGY MLDKLTSLTE LDLSSNNLGG DLPYQFPPNL 120
121 QRLNLANNQF TGAASYSLSQ ITPLKYLNLG HNQFKGQIAI DFSKLDSLTT LDFSFNSFTN 180
181 SLPATFSSLT SLKSLYLQNN QFSGTVDVLA GLPLETLNIA NNDFTGWIPS SLKGITLIKD 240
241 GNSFNTGPAP PPPPGTPPIR GSPSRKSGGR ESRSSDESTR NGDSKKSGIG AGAIAGIIIS 300
301 LLVVTALLVA FFLFRRKKSK RSSPMDIEKT DNQPFTLASN DFHENNSIQS SSSVETKKLD 360
361 TSLSINLRPP PIDRNKSFDD EDSTRKPIAV KK
|
| Detection Method: |  |
| Confidence: | 15.522879 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| protein binding | 1.69661396118522 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| nucleic acid binding | 1.17568458983071 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.16530645523007 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| kinase activity | 1.11577341189523 | bayes_pls_golite062009 |
| receptor activity | 0.823142813332745 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.569410390698942 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| signal transducer activity | 0.405945668463821 | bayes_pls_golite062009 |
| molecular transducer activity | 0.405945668463821 | bayes_pls_golite062009 |
|
Region A: Residues: [393-719] |
1 11 21 31 41 51
| | | | | |
1 STVVVPSNVR LYSVADLQIA TGSFSVDNLL GEGTFGRVYR AEFDDGKVLA VKKIDSSALP 60
61 HGMTDDFIEM VSKIANLDHP NVTKLVGYCA EHGQHLVVYE FHKNGSLHDF LHLSEEESKA 120
121 LVWNSRVKIA LGTARALEYL HEVCSPSIVD KNIKSANILL DSELNPHLSD SGLASFLPTA 180
181 NELLNQTDEG YSAPEVSMSG QYSLKSDIYS FGVVMLELLT GRKPFDSTRS RSEQSLVRWA 240
241 TPQLHDIDAL AKMVDPALKG LYPVKSLSRF ADVIALCVQP EPEFRPPMSE VVQALVVLVQ 300
301 RANMSKRTVG VDPSQRAGSA DTTSDYM
|
| Detection Method: | |
| Confidence: | 67.221849 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
