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Protein Overview: LAC3_ARATH

General Information:
Name(s) found: LAC3_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 570 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IEA]
    endomembrane system [IEA]
    Biological Process: lignin catabolic process [IEA]
    oxidation reduction [IEA]
    Molecular Function: laccase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESFRRFSLL SFIALLAYFA FLASAEHHVH QFVITPTPVK RLCRTHQSIT VNGQYPGPTL  60
   61 VVRNGDSLAI TVINRARYNI SIHWHGIRQL RNPWADGPEY ITQCPIRPGQ TYTYRFKIED 120
  121 QEGTLWWHAH SRWLRATVYG ALIIYPRLGS PYPFSMPKRD IPILLGEWWD RNPMDVLKQA 180
  181 QFTGAAANVS DAYTINGQPG DLYRCSRAGT IRFPIFPGET VQLRVINAGM NQELFFSVAN 240
  241 HQFTVVETDS AYTKPFTTNV IMIGPGQTTN VLLTANQRPG RYYMAARAYN SANAPFDNTT 300
  301 TTAILQYVNA PTRRGRGRGQ IAPVFPVLPG FNDTATATAF TNRLRYWKRA PVPQQVDENL 360
  361 FFTVGLGLIN CANPNSPRCQ GPNGTRFAAS MNNMSFVLPR SNSVMQAYYQ GTPGIFTTDF 420
  421 PPVPPVQFDY TGNVSRGLWQ PIKGTKAYKL KYKSNVQIVL QDTSIVTPEN HPMHLHGYQF 480
  481 YVVGSGFGNF NPRTDPARFN LFDPPERNTI GTPPGGWVAI RFVADNPGAW FMHCHIDSHL 540
  541 GWGLAMVFLV ENGRGQLQSV QAPPLDLPRC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..570] PSI-BLAST 88.522879 Ascorbate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  5.98463819317772 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.80679334235027 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.70382790500795 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  4.35501871300326 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.30470923318097 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  3.4840258390283 bayes_pls_golite062009
  • copper ion binding
    		•  3.27145156911424 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.9428517783106 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.82570802206273 bayes_pls_golite062009
  • transporter activity
    		•  2.75690053147562 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
    		•  2.70015092777938 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.67027550825653 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.42871678736924 bayes_pls_golite062009
  • ferroxidase activity
    		•  2.11615717093435 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  2.11615717093435 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.88441243755534 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions
    		•  1.53022807908394 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.17954317549442 bayes_pls_golite062009
  • binding
    		•  1.14851914699653 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  0.379596275876029 bayes_pls_golite062009
  • cation binding
    		•  0.305777337672225 bayes_pls_golite062009
  • metal ion binding
    		•  0.305777337672225 bayes_pls_golite062009
  • ion binding
    		•  0.300057966011705 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.269767937058687 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.262778393547427 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.222255654263847 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.222255654263847 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  0.222255654263847 bayes_pls_golite062009
  • protein binding
    		•  0.19183671060378 bayes_pls_golite062009
  • receptor binding
    		•  0.0601969032951899 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.049534674746601 bayes_pls_golite062009
  • signal transducer activity
    		•  0.049534674746601 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.0246677473353576 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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