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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESFRRFSLL SFIALLAYFA FLASAEHHVH QFVITPTPVK RLCRTHQSIT VNGQYPGPTL  60
   61 VVRNGDSLAI TVINRARYNI SIHWHGIRQL RNPWADGPEY ITQCPIRPGQ TYTYRFKIED 120
  121 QEGTLWWHAH SRWLRATVYG ALIIYPRLGS PYPFSMPKRD IPILLGEWWD RNPMDVLKQA 180
  181 QFTGAAANVS DAYTINGQPG DLYRCSRAGT IRFPIFPGET VQLRVINAGM NQELFFSVAN 240
  241 HQFTVVETDS AYTKPFTTNV IMIGPGQTTN VLLTANQRPG RYYMAARAYN SANAPFDNTT 300
  301 TTAILQYVNA PTRRGRGRGQ IAPVFPVLPG FNDTATATAF TNRLRYWKRA PVPQQVDENL 360
  361 FFTVGLGLIN CANPNSPRCQ GPNGTRFAAS MNNMSFVLPR SNSVMQAYYQ GTPGIFTTDF 420
  421 PPVPPVQFDY TGNVSRGLWQ PIKGTKAYKL KYKSNVQIVL QDTSIVTPEN HPMHLHGYQF 480
  481 YVVGSGFGNF NPRTDPARFN LFDPPERNTI GTPPGGWVAI RFVADNPGAW FMHCHIDSHL 540
  541 GWGLAMVFLV ENGRGQLQSV QAPPLDLPRC 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle