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Protein Overview: gi|58331799, gi|...

General Information:
Name(s) found: gi|9502172 [NCBI NR]
gi|6041819 [NCBI NR]
gi|58331799 [NCBI NR]
gi|56381911 [NCBI NR]
gi|21595601 [NCBI NR]
gi|18399308 [NCBI NR]
Description(s) found:
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  • gi|9502172|gb|AAF88021.1|AF264697_1 NDR1/HIN1-Like protein 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|6041819|gb|AAF02134.1|AC009918_6 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|58331799|gb|AAW70397.1| At3g11660 [Arabidopsis thaliana] [NCBI NR]
  • gi|56381911|gb|AAV85674.1| At3g11660 [Arabidopsis thaliana] [NCBI NR]
  • gi|21595601|gb|AAM66116.1| harpin-induced protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|18399308|ref|NP_566396.1| NHL1 [Arabidopsis thaliana] [NCBI NR]
  • (Q9SRN0) T19F11.6 protein (NDR1/HIN1-like protein 1) (Harpin-induced protein-like) [athaliana3702.FASTAC.txt]
  • NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]gi|6041819|gb|AAF02134.1| unknown protein [Arabidopsis thaliana]gi|21595601|gb|AAM66116.1| harpin-induced protein-like [Arabidopsis thaliana]gi|18399308|ref|NP_566396.1| harpin-induced family protein / HIN [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Harpin-induced family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: NHL1 | NHL1 (NDR1/HIN1-like 1) | chr3:3679037-3679666 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At3g11660 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • harpin-induced protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • NDR1/HIN1-Like protein 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • NHL1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: NHL1 | NDR1/HIN1-like 1 | chr3:3679031-3679660 REVERSE LENGTH=209 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At3g11660 OS=Arabidopsis thaliana GN=T19F11.6 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 209 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: defense response to virus [IEP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS  60
   61 GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ QITFPTSIPP TYQGHKDVDI 120
  121 WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY 180
  181 INFGNKANGV IVGDNAVKYT FTTSCSVSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] FFAS03 1.73 Solution structure of AT1g01470 from Arabidopsis Thaliana


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle