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View Structure Prediction Details

Protein: gi|58331799, gi|...
Organism: Arabidopsis thaliana
Length: 209 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|58331799, gi|....

Description E-value Query
Range
Subject
Range
gi|28392929 - gi|28392929|gb|AAO41900.1| putative VAMP protein SEC22 [Arabidopsis thaliana]
230.0 [0..1] [209..1]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS  60
   61 GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ QITFPTSIPP TYQGHKDVDI 120
  121 WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY 180
  181 INFGNKANGV IVGDNAVKYT FTTSCSVSV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.73
Match: 1xo8A
Description: Solution structure of AT1g01470 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle