YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58331799, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS  60
   61 GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ QITFPTSIPP TYQGHKDVDI 120
  121 WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY 180
  181 INFGNKANGV IVGDNAVKYT FTTSCSVSV

Type	Start	End	Confidence
Cytoplasmic	1	17	0.98
Transmembrane Helix	18	40	0.95
Non-Cytoplasmic	41	209	0.99