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Protein Overview: RAD17_ARATH

General Information:
Name(s) found: RAD17_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Cell cycle checkpoint protein RAD17 OS=Arabidopsis thaliana GN=RAD17 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 599 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    chloroplast [IEA]
    Biological Process: regulation of DNA repair [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKKLSLED EDDDRSYNLR SSRSNAKSKP RSSAGTATNP RASKRARLSG ASATQEDSSL  60
   61 VDKIRLSFED FDEALSGFKV SSGYERSKNT DLWVDKYRPR TLEELSVHKK KVDEVKLWFQ 120
  121 ESLDFLKNGL RNNVLLVTGQ AGVGKSATIH LITSILGVTV HEWNAPIPTI WQEHVHNTSS 180
  181 GLKYTSKLDE FENFVESTRK YGVMASSSTD GIKAPVVLLI DDLPLANGRH AFERLQNCLL 240
  241 LLVKSTQIPT VILITDHNNA DSSDQTARRM EDTQSSLERA GALKVAFNPI TKNSIKKVLQ 300
  301 RICREEHCKV TTMEIDQMAT ASGGDIRHAI TSLQLFSVKP ELNHTKIKSP RPGMEDNYHG 360
  361 NEQTMYSGLD SGISSCFGRD ETLSLFHALG KFLHNKRETD NVIISECSSS LVHDEFARLP 420
  421 LKMDAPEKVL SQAHGQAGRV VDFLHENVLD FVSDGAIEDA WCVSSYLADA DLLLADIRGK 480
  481 MSGHNNTEDV PQSAGASVAV RGVLYGNKQP CSSRWHVIRK PKLWQVEQSS IQTKKNLREQ 540
  541 RNISYEGSRV ADISVMATEY SPVLKWLSYR ASPDAFPGMG EETDEEDSDI SEDDEIQDW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] PSI-BLAST 21.30103 Crystal Structure Analysis of ClpB
    2 View Details [88..599] PSI-BLAST 77.522879 EDTA treated

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009
  • hydrolase activity
    		•  1.18412998130788 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.16998111465319 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.16375481834344 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.15942143195918 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.15882580213621 bayes_pls_golite062009
  • binding
    		•  1.10726811465896 bayes_pls_golite062009
  • ATPase activity
    		•  0.62253664120117 bayes_pls_golite062009
  • helicase activity
    		•  0.00674361801283974 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle