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Protein Overview: PME6_ARATH

General Information:
Name(s) found: PME6_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9295687|gb|AAF86993.1|AC005292_2 F26F24.2 [Arabidopsis thaliana] [NCBI NR]
  • gi|75278018|sp|O49298.1|PME6_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 6; Includes: RecName: Full=Pectinesterase inhibitor 6; AltName: Full=Pectin methylesterase inhibitor 6; Includes: RecName: Full=Pectinesterase 6; Short=PE 6; [NCBI NR]
  • gi|2829892|gb|AAC00600.1| putative pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • pir||C86366 protein F26F24.2 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20259097|gb|AAM14264.1| putative pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • gi|17529058|gb|AAL38739.1| putative pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • gi|15220671|ref|NP_173733.1| pectinesterase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110742328|dbj|BAE99088.1| putative pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1 [Swiss-Prot]
  • (O49298) Putative pectinesterase (F26F24.2) [athaliana3702.FASTAC.txt]
  • putative pectinesterase [Arabidopsis thaliana]gi|17529058|gb|AAL38739.1| putative pectinesterase [Arabidopsis thaliana]gi|15220671|ref|NP_173733.1| pectinesterase family protein [Arabidopsis thaliana]gi|25313428|pir||C86366 protein F26F24.2 [imported] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pectinesterase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | pectinesterase family protein | chr1:8227225-8229389 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative pectinesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • F26F24.2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr1:8227236-8229400 FORWARD LENGTH=554 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IEA]
    endomembrane system [IEA]
    plant-type cell wall [ISS]
    Biological Process: cell wall modification [IEA]
    Molecular Function: enzyme inhibitor activity [IEA]
    pectinesterase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHKILLTPP KSLYTKCIIT IIYVVSISHL NAHFITSCKQ TPYPSVCDHH MSNSPLKTLD  60
   61 DQTDGFTFHD LVVSSTMDQA VQLHRLVSSL KQHHSLHKHA TSALFDCLEL YEDTIDQLNH 120
  121 SRRSYGQYSS PHDRQTSLSA AIANQDTCRN GFRDFKLTSS YSKYFPVQFH RNLTKSISNS 180
  181 LAVTKAAAEA EAVAEKYPST GFTKFSKQRS SAGGGSHRRL LLFSDEKFPS WFPLSDRKLL 240
  241 EDSKTTAKAD LVVAKDGSGH YTSIQQAVNA AAKLPRRNQR LVIYVKAGVY RENVVIKKSI 300
  301 KNVMVIGDGI DSTIVTGNRN VQDGTTTFRS ATFAVSGNGF IAQGITFENT AGPEKHQAVA 360
  361 LRSSSDFSVF YACSFKGYQD TLYLHSSRQF LRNCNIYGTV DFIFGDATAI LQNCNIYARK 420
  421 PMSGQKNTIT AQSRKEPDET TGFVIQSSTV ATASETYLGR PWRSHSRTVF MKCNLGALVS 480
  481 PAGWLPWSGS FALSTLYYGE YGNTGAGASV SGRVKWPGYH VIKTVTEAEK FTVENFLDGN 540
  541 YWITATGVPV NDGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] PSI-BLAST 21.221849 Crystal structure of the complex between pectin methylesterase and its inhibitor protein
    2 View Details [226..554] PSI-BLAST 97.0 Pectin methylesterase PemA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.142826098671881 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle