| Protein: | PME6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 554 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
513.0 | [0..3] | [554..19] |
|
Region A: Residues: [1-225] |
1 11 21 31 41 51
| | | | | |
1 MDHKILLTPP KSLYTKCIIT IIYVVSISHL NAHFITSCKQ TPYPSVCDHH MSNSPLKTLD 60
61 DQTDGFTFHD LVVSSTMDQA VQLHRLVSSL KQHHSLHKHA TSALFDCLEL YEDTIDQLNH 120
121 SRRSYGQYSS PHDRQTSLSA AIANQDTCRN GFRDFKLTSS YSKYFPVQFH RNLTKSISNS 180
181 LAVTKAAAEA EAVAEKYPST GFTKFSKQRS SAGGGSHRRL LLFSD
|
| Detection Method: |  |
| Confidence: | 21.221849 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [226-554] |
1 11 21 31 41 51
| | | | | |
1 EKFPSWFPLS DRKLLEDSKT TAKADLVVAK DGSGHYTSIQ QAVNAAAKLP RRNQRLVIYV 60
61 KAGVYRENVV IKKSIKNVMV IGDGIDSTIV TGNRNVQDGT TTFRSATFAV SGNGFIAQGI 120
121 TFENTAGPEK HQAVALRSSS DFSVFYACSF KGYQDTLYLH SSRQFLRNCN IYGTVDFIFG 180
181 DATAILQNCN IYARKPMSGQ KNTITAQSRK EPDETTGFVI QSSTVATASE TYLGRPWRSH 240
241 SRTVFMKCNL GALVSPAGWL PWSGSFALST LYYGEYGNTG AGASVSGRVK WPGYHVIKTV 300
301 TEAEKFTVEN FLDGNYWITA TGVPVNDGL
|
| Detection Method: | |
| Confidence: | 97.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
