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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME6_ARATH
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHKILLTPP KSLYTKCIIT IIYVVSISHL NAHFITSCKQ TPYPSVCDHH MSNSPLKTLD  60
   61 DQTDGFTFHD LVVSSTMDQA VQLHRLVSSL KQHHSLHKHA TSALFDCLEL YEDTIDQLNH 120
  121 SRRSYGQYSS PHDRQTSLSA AIANQDTCRN GFRDFKLTSS YSKYFPVQFH RNLTKSISNS 180
  181 LAVTKAAAEA EAVAEKYPST GFTKFSKQRS SAGGGSHRRL LLFSDEKFPS WFPLSDRKLL 240
  241 EDSKTTAKAD LVVAKDGSGH YTSIQQAVNA AAKLPRRNQR LVIYVKAGVY RENVVIKKSI 300
  301 KNVMVIGDGI DSTIVTGNRN VQDGTTTFRS ATFAVSGNGF IAQGITFENT AGPEKHQAVA 360
  361 LRSSSDFSVF YACSFKGYQD TLYLHSSRQF LRNCNIYGTV DFIFGDATAI LQNCNIYARK 420
  421 PMSGQKNTIT AQSRKEPDET TGFVIQSSTV ATASETYLGR PWRSHSRTVF MKCNLGALVS 480
  481 PAGWLPWSGS FALSTLYYGE YGNTGAGASV SGRVKWPGYH VIKTVTEAEK FTVENFLDGN 540
  541 YWITATGVPV NDGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle