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Protein Overview: gi|9972390, gi|1...

General Information:
Name(s) found: gi|9972390 [NCBI NR]
gi|66792702 [NCBI NR]
gi|25406725 [NCBI NR]
gi|18378969 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|9972390|gb|AAG10640.1|AC022521_18 Putative polygalacturonase [Arabidopsis thaliana] [NCBI NR]
  • gi|66792702|gb|AAY56453.1| At1g02460 [Arabidopsis thaliana] [NCBI NR]
  • pir||B86155 probable polygalacturonase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18378969|ref|NP_563654.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEA][ISS]
    Molecular Function: polygalacturonase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT  60
   61 PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG ETDDTEAFKT AWDSSCNNEN 120
  121 NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR 180
  181 VNGMALKGEG VIDGRGQKWW DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ 240
  241 IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI 300
  301 GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG 360
  361 SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV FVSDIAYQGI KGTYDIRSPP 420
  421 MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL 480
  481 QGSLVDKCGS S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..491] PSI-BLAST 49.09691 No description for 2uveA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle