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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9972390, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT  60
   61 PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG ETDDTEAFKT AWDSSCNNEN 120
  121 NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR 180
  181 VNGMALKGEG VIDGRGQKWW DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ 240
  241 IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI 300
  301 GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG 360
  361 SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV FVSDIAYQGI KGTYDIRSPP 420
  421 MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL 480
  481 QGSLVDKCGS S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle