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View Structure Prediction Details

Protein: gi|9972390, gi|1...
Organism: Arabidopsis thaliana
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9972390, gi|1....

Description E-value Query
Range
Subject
Range
gi|15294256 - gi|15294256|gb|AAK95305.1|AF410319_1 At1g48100/F21D18_17 [Arabidopsis thaliana]
329.0 [0..15] [477..15]

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Predicted Domain #1
Region A:
Residues: [1-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT  60
   61 PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG ETDDTEAFKT AWDSSCNNEN 120
  121 NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR 180
  181 VNGMALKGEG VIDGRGQKWW DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ 240
  241 IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI 300
  301 GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG 360
  361 SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV FVSDIAYQGI KGTYDIRSPP 420
  421 MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL 480
  481 QGSLVDKCGS S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.09691
Match: 2uveA
Description: No description for 2uveA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle