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Protein Overview: NAP1A_ARATH

General Information:
Name(s) found: NAP1A_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Nucleosome assembly protein 1;1 OS=Arabidopsis thaliana GN=NAP1;1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 372 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    cytoplasm [IDA]
    plasma membrane [IDA]
    Biological Process: DNA repair [IGI]
    nucleosome assembly [ISS]
    Molecular Function: DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNDKDSFNV SDLTAALKDE DRAGLVNALK NKLQNLAGQR SDVLENLTPN VRKRVDALRD  60
   61 IQSQHDELEA KFREERAILE AKYQTLYQPL YVKRYEIVNG TTEVELAPED DTKVDQGEEK 120
  121 TAEEKGVPSF WLTALKNNDV ISEEVTERDE GALKYLKDIK WCKIEEPKGF KLEFFFDTNP 180
  181 YFKNTVLTKS YHMIDEDEPL LEKAMGTEID WYPGKCLTQK ILKKKPKKGS KNTKPITKLE 240
  241 DCESFFNFFS PPEVPDEDED IDEERAEDLQ NLMEQDYDIG STIREKIIPR AVSWFTGEAM 300
  301 EAEDFEIDDD EEDDIDEDED EEDEEDEEDD DDEDEEESKT KKKPSIGNKK GGRSQIVGEG 360
  361 KQDERPPECK QQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..298] PSI-BLAST 64.0 The structure of nucleosome assembly protein suggests a mechanism for histone binding and shuttling
    2 View Details [299..372] FFAS03 1.16 Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • histone binding
    		•  4.83364158381373 bayes_pls_golite062009
  • binding
    		•  2.47653887993806 bayes_pls_golite062009
  • protein binding
    		•  1.48698502617247 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.320444049924598 bayes_pls_golite062009
  • DNA binding
    		•  0.235974054244229 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle