| Protein: | NAP1A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 372 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAP1A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..1] | [372..1] |
|
Region A: Residues: [1-298] |
1 11 21 31 41 51
| | | | | |
1 MSNDKDSFNV SDLTAALKDE DRAGLVNALK NKLQNLAGQR SDVLENLTPN VRKRVDALRD 60
61 IQSQHDELEA KFREERAILE AKYQTLYQPL YVKRYEIVNG TTEVELAPED DTKVDQGEEK 120
121 TAEEKGVPSF WLTALKNNDV ISEEVTERDE GALKYLKDIK WCKIEEPKGF KLEFFFDTNP 180
181 YFKNTVLTKS YHMIDEDEPL LEKAMGTEID WYPGKCLTQK ILKKKPKKGS KNTKPITKLE 240
241 DCESFFNFFS PPEVPDEDED IDEERAEDLQ NLMEQDYDIG STIREKIIPR AVSWFTGE
|
| Detection Method: |  |
| Confidence: | 64.0 |
| Match: | 2ayuA |
| Description: | The structure of nucleosome assembly protein suggests a mechanism for histone binding and shuttling |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone binding | 4.83364158381373 | bayes_pls_golite062009 |
| binding | 2.47653887993806 | bayes_pls_golite062009 |
| protein binding | 1.48698502617247 | bayes_pls_golite062009 |
| nucleic acid binding | 0.320444049924598 | bayes_pls_golite062009 |
| DNA binding | 0.235974054244229 | bayes_pls_golite062009 |
|
Region A: Residues: [299-372] |
1 11 21 31 41 51
| | | | | |
1 AMEAEDFEID DDEEDDIDED EDEEDEEDEE DDDDEDEEES KTKKKPSIGN KKGGRSQIVG 60
61 EGKQDERPPE CKQQ
|
| Detection Method: | |
| Confidence: | 1.16 |
| Match: | 1wckA |
| Description: | Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore. |
Matching Structure (courtesy of the PDB): |
|
