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Protein Overview: gi|25310860, gi|...

General Information:
Name(s) found: gi|3608130 [NCBI NR]
gi|25310860 [NCBI NR]
gi|15227449 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|3608130|gb|AAC36163.1| putative serpin [Arabidopsis thaliana] [NCBI NR]
  • pir||D84770 probable serpin [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227449|ref|NP_181101.1| serpin family protein / serine protease inhibitor family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 374 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: serine-type endopeptidase inhibitor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLEESIEKQ YKAMMDLKES VGNQNDIVLR LTAPLINVIL SIIAASSPGD TDTADKIVSL  60
   61 LQASSTDKLH AVSSEIVTTV LADSTASGGP TISAANGLWI EKTLNVEPSF KDLLLNSYKA 120
  121 AFNRVDFRTK ADEVNREVNS WVEKQTNGLI TNLLPSNPKS APLTDHIFAN ALFFNGRWDS 180
  181 QFDPSLTKDS DFHLLDGTKV RVPFMTGASC RYTHVYEGFK VINLQYRRGR EDSRSFSMQI 240
  241 YLPDEKDGLP SMLERLASTR GFLKDNEVLP SHSAVIKELK IPRFKFDFAF EASEALKGFG 300
  301 LVVPLSMIMH KSCIEVDEVG SKAAAAAAFR GIGCRRPPPE KHDFVADHPF LFIVKEYRSG 360
  361 LVLFLGQVMD PSKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..374] PSI-BLAST 86.0 Plasminogen activator inhibitor-2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • serine-type endopeptidase inhibitor activity
    		•  6.13717785773502 bayes_pls_golite062009
  • peptidase inhibitor activity
    		•  6.07523919900796 bayes_pls_golite062009
  • endopeptidase inhibitor activity
    		•  6.01194624525726 bayes_pls_golite062009
  • enzyme inhibitor activity
    		•  3.67290572457064 bayes_pls_golite062009
  • enzyme regulator activity
    		•  2.47388770421699 bayes_pls_golite062009
  • protein binding
    		•  1.90236643189719 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.61358221181146 bayes_pls_golite062009
  • binding
    		•  1.59116569287481 bayes_pls_golite062009
  • protease binding
    		•  1.29845660140052 bayes_pls_golite062009
  • heparin binding
    		•  1.21540270241849 bayes_pls_golite062009
  • receptor binding
    		•  1.0390886965673 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.99559313679422 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.886587024030757 bayes_pls_golite062009
  • DNA binding
    		•  0.727731769362344 bayes_pls_golite062009
  • transporter activity
    		•  0.565770148972028 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.322597350826311 bayes_pls_golite062009
  • growth factor activity
    		•  0.21183671094477 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle