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Protein Overview: RTNLM_ARATH

General Information:
Name(s) found: RTNLM_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75099222|sp|O64837.1|RTNLM_ARATH RecName: Full=Reticulon-like protein B13; Short=AtRTNLB13 [NCBI NR]
  • pir||T01153 probable seed maturation protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3152617|gb|AAC17096.1| putative seed maturation protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20197004|gb|AAM14868.1| putative seed maturation protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18400337|ref|NP_565555.1| reticulon family protein (RTNLB13) [Arabidopsis thaliana] [NCBI NR]
  • Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2 SV=1 [Swiss-Prot]
  • (O64837) Putative seed maturation protein [athaliana3702.FASTAC.txt]
  • putative seed maturation protein [Arabidopsis thaliana]gi|20197004|gb|AAM14868.1| putative seed maturation protein [Arabidopsis thaliana]gi|7459596|pir||T01153 probable seed maturation protein [imported] - Arabidopsis thalianagi|18400337|ref|NP_565555. [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Reticulon family protein (RTNLB13) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | reticulon family protein (RTNLB13) | chr2:10064634-10066122 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative seed maturation protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RTNLB13 | Reticulan like protein B13 | chr2:10057554-10059042 FORWARD LENGTH=206 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 206 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [IDA]
    endoplasmic reticulum [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANDVTKDPT PKSDIVEDIY LWRRKKLAFS TLLVSTSTWI LLSFYGFTTI TIVSWIGIAV  60
   61 VSMIFLWGSL LRLLSKVEPE LSGLEVSEEF VVETVRSCRM LMEEMVRWMF RVGAESEWFV 120
  121 FARTVLGFWI LSRIGNLLDF HTCLFIGLVM GLTVPKLWEE YGDQIQKHLG SLKDKSKGAY 180
  181 NTTHEKILEM KNKLHHGTEE KVKKSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 9.0 No description for 2g31A was found.
    2 View Details [117..206] MSA 5.134995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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