YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SKP1A_ARATH

General Information:
Name(s) found: SKP1A_ARATH [Swiss-Prot]
Description(s) found:
Found 31 descriptions.
SHOW ALL
  • SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][NAS]
    ubiquitin ligase complex [TAS]
    cytoplasm [NAS]
    spindle [IDA]
    SCF ubiquitin ligase complex [NAS]
    plasma membrane [IDA]
    phragmoplast [IDA]
    Biological Process: male meiosis [IMP]
    mitosis [TAS]
    response to cadmium ion [IEP]
    ubiquitin-dependent protein catabolic process [TAS]
    negative regulation of DNA recombination [IMP]
    Molecular Function: ubiquitin-protein ligase activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKKIVLKS SDGESFEVEE AVALESQTIA HMVEDDCVDN GVPLPNVTSK ILAKVIEYCK  60
   61 RHVEAAASKA EAVEGAATSD DDLKAWDADF MKIDQATLFE LILAANYLNI KNLLDLTCQT 120
  121 VADMIKGKTP EEIRTTFNIK NDFTPEEEEE VRRENQWAFE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. SKP1A_ARATH gi|47169278, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 60.522879 No description for 2p1mA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle